EXOSC1 inhibitors encompass a range of chemical compounds designed to specifically target and hinder the activity of the EXOSC1 protein, a component of the exosome complex involved in RNA processing and degradation. EXOSC1, as part of the RNA exosome, plays a crucial role in the maturation and degradation of various RNA molecules within the cell. Inhibitors of EXOSC1 function to disrupt this process by binding directly to the protein or interfering with its associated pathways, leading to the accumulation of RNA substrates that would otherwise be degraded. The action of these inhibitors can affect the RNA exosome's role in the regulation of gene expression, RNA processing, and cellular response to stress, which are vital for maintaining normal cellular function.
The design of EXOSC1 inhibitors is based on the understanding of the protein's structure and its interaction with RNA substrates. These inhibitors can act by mimicking the natural substrates of the exosome complex, thereby blocking the active site of the EXOSC1 protein and preventing it from binding to its RNA targets. Alternatively, they may interact with regulatory regions of EXOSC1, altering its conformation and thus its function within the exosome. By impeding the normal function of EXOSC1, these inhibitors can lead to a specific decrease in the degradation of certain classes of RNA, resulting in an upregulation of RNA species that are typically kept at low levels. The precise mechanisms by which EXOSC1 inhibitors exert their effects are diverse and can depend on the particular chemical structure of the inhibitor and its interaction with the EXOSC1 protein or its co-factors within the exosome complex.
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| Product Name | CAS # | Catalog # | QUANTITY | Price | Citations | RATING |
|---|---|---|---|---|---|---|
Triptolide | 38748-32-2 | sc-200122 sc-200122A | 1 mg 5 mg | $90.00 $204.00 | 13 | |
Triptolide targets multiple pathways, including the transcription of RNA. By inhi | ||||||
Actinomycin D | 50-76-0 | sc-200906 sc-200906A sc-200906B sc-200906C sc-200906D | 5 mg 25 mg 100 mg 1 g 10 g | $74.00 $243.00 $731.00 $2572.00 $21848.00 | 53 | |
Actinomycin D intercalates DNA and prevents RNA synthesis. With reduced transcription, EXOSC1 has less RNA substrate for degradation, thus indirectly inhibiting its function. | ||||||
Cordycepin | 73-03-0 | sc-203902 | 10 mg | $101.00 | 5 | |
Cordycepin is an adenosine analog that terminates RNA transcription. By halting the production of RNA, it indirectly limits the functional role of EXOSC1 in RNA decay. | ||||||
α-Amanitin | 23109-05-9 | sc-202440 sc-202440A | 1 mg 5 mg | $269.00 $1050.00 | 26 | |
α-Amanitin inhibits RNA polymerase II which is necessary for mRNA synthesis. Reduced mRNA synthesis would lead to reduced EXOSC1-mediated RNA degradation. | ||||||
DRB | 53-85-0 | sc-200581 sc-200581A sc-200581B sc-200581C | 10 mg 50 mg 100 mg 250 mg | $43.00 $189.00 $316.00 $663.00 | 6 | |
DRB is an adenosine analog that inhibits RNA polymerase II, thus reducing RNA synthesis and indirectly impacting EXOSC1's RNA decay pathway. | ||||||
β-Lapachone | 4707-32-8 | sc-200875 sc-200875A | 5 mg 25 mg | $112.00 $459.00 | 8 | |
β-Lapachone has been shown to inhibit RNA polymerase I, leading to a decrease in rRNA synthesis. This would result in a reduced substrate for EXOSC1, thereby inhibiting its function. | ||||||
Leptomycin B | 87081-35-4 | sc-358688 sc-358688A sc-358688B | 50 µg 500 µg 2.5 mg | $107.00 $416.00 $1248.00 | 35 | |
Leptomycin B inhibits the export of mRNA from the nucleus to the cytoplasm. By preventing mRNA export, EXOSC1's role in mRNA degradation in the cytoplasm is indirectly inhibited. | ||||||
Flavopiridol | 146426-40-6 | sc-202157 sc-202157A | 5 mg 25 mg | $78.00 $259.00 | 41 | |
Flavopiridol inhibits Cyclin-dependent kinases which are required for RNA polymerase II phosphorylation and subsequent RNA synthesis. This reduces EXOSC1's RNA degradation substrate. | ||||||
Quercetin | 117-39-5 | sc-206089 sc-206089A sc-206089E sc-206089C sc-206089D sc-206089B | 100 mg 500 mg 100 g 250 g 1 kg 25 g | $11.00 $17.00 $110.00 $250.00 $936.00 $50.00 | 33 | |
Quercetin can inhibit the phosphorylation of splicing factors, which may reduce mRNA processing and in turn, decrease the availability of RNA for EXOSC1-mediated decay. | ||||||
Rocaglamide | 84573-16-0 | sc-203241 sc-203241A sc-203241B sc-203241C sc-203241D | 100 µg 1 mg 5 mg 10 mg 25 mg | $275.00 $474.00 $1639.00 $2497.00 $5344.00 | 4 | |
Rocaglamide inhibits translation initiation. By reducing the overall level of mRNA translation, there is less RNA for EXOSC1 to degrade, thus indirectly inhibiting its function. | ||||||