Date published: 2026-4-24

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CLK1 Inhibitors

CLK1 inhibitors, as detailed in the table, are primarily chemicals that indirectly affect the activity of CLK1 by modulating related kinases or splicing processes. CLK1 plays a significant role in the regulation of alternative splicing by phosphorylating SR proteins, which are essential components of the spliceosome.The main approach to indirectly inhibiting CLK1 involves targeting its kinase activity. Compounds like TG003 and KH-CB19 are known to inhibit CLK1, thereby impacting the phosphorylation of SR proteins and influencing alternative splicing. Chlorhexidine, though primarily known as an antimicrobial agent, has been found to inhibit CLK1 activity. Cdc2-like kinase inhibitors, while not specific, can also affect CLK1 due to the similarity in their kinase domains. Harmine, a DYRK inhibitor, could potentially influence CLK1 due to cross-reactivity among kinases. Indirubin and its derivatives, including Drubin, are non-selective kinase inhibitors that may inhibit CLK1 among other kinases. Leucettine L41, targeting both CLK1 and DYRK1A, can also influence alternative splicing regulated by CLK1. 5-Iodotubercidin is primarily an adenosine kinase inhibitor but has been shown to have inhibitory effects on CLK1 as well. Harmaline, related to harmine, could potentially affect CLK1 activity. Lastly, Quercetin, a plant flavonoid known for its broad kinase inhibitory activity, might impact CLK1 among other kinases.
Product NameCAS #Catalog #QUANTITYPriceCitationsRATING

Cdc2-Like Kinase Inhibitor, TG003

300801-52-9sc-202528
sc-202528A
5 mg
25 mg
$139.00
$548.00
6
(0)

Inhibits CLK1 and other CLKs, affecting SR protein phosphorylation and alternative splicing.

KH CB19

1354037-26-5sc-362756
sc-362756A
1 mg
5 mg
$214.00
$612.00
1
(0)

A potent CLK inhibitor, can impact CLK1 activity and consequently alternative splicing processes.

Chlorhexidine

55-56-1sc-252568
5 g
$103.00
3
(0)

Known to inhibit CLK1, affecting its role in RNA splicing.

L-3,3′,5-Triiodothyronine, free acid

6893-02-3sc-204035
sc-204035A
sc-204035B
10 mg
100 mg
250 mg
$41.00
$77.00
$153.00
(1)

T3 is a benzothiazole-based CLK inhibitor that targets multiple CLK isoforms, including CLKIt has been shown to modulate alternative splicing events regulated by CLK1.

Harmine

442-51-3sc-202644
sc-202644A
sc-202644B
sc-202644C
sc-202644D
sc-202644E
sc-202644F
250 mg
500 mg
1 g
10 g
50 g
100 g
500 g
$53.00
$104.00
$126.00
$551.00
$1467.00
$2611.00
$11455.00
2
(2)

Acts as a dual-specificity tyrosine phosphorylation-regulated kinase (DYRK) inhibitor, potentially influencing CLK1.

Indirubin

479-41-4sc-201531
sc-201531A
5 mg
25 mg
$114.00
$525.00
4
(1)

A non-selective inhibitor of various kinases, including CLK1.

PF 670462

950912-80-8sc-204180
sc-204180A
10 mg
50 mg
$198.00
$808.00
9
(1)

PF-670462 is a potent inhibitor of CLK1 and other CLK isoforms. It has been explored for its potential in modulating CLK1-mediated splicing and cellular processes.

5-Iodotubercidin

24386-93-4sc-3531
sc-3531A
1 mg
5 mg
$153.00
$464.00
20
(2)

An adenosine kinase inhibitor that can also inhibit CLK1.

CX-4945

1009820-21-6sc-364475
sc-364475A
2 mg
50 mg
$183.00
$800.00
9
(2)

CX-4945, also known as Silmitasertib, is a potent inhibitor of CLK1 and other CLK isoforms. It has been studied in the context of cancer therapy due to its ability to target CLK-mediated splicing and affect tumor growth.

Quercetin

117-39-5sc-206089
sc-206089A
sc-206089E
sc-206089C
sc-206089D
sc-206089B
100 mg
500 mg
100 g
250 g
1 kg
25 g
$11.00
$17.00
$110.00
$250.00
$936.00
$50.00
33
(2)

A flavonoid with kinase inhibitory activity, potentially impacting CLK1.