Date published: 2026-4-1

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ATPAF2 Inhibitors

ATPAF2 consits of inhibitors like Oligomycin A, Antimycin A, Rotenone, TTFA, Carboxin, Azide, and Cyanide operate by directly binding to and inhibiting key enzymes within the ETC. These inhibitors lead to a reduction in electron flow, which subsequently lowers the proton gradient across the mitochondrial inner membrane. The decrease in proton motive force directly impacts ATP synthase, the enzyme complex responsible for harnessing the energy of the proton gradient to synthesize ATP. Inhibition of ATP synthase by these chemicals can result in an environment where ATPAF2's role in the assembly of ATP synthase is less critical, as the driving force for ATP production is compromised.

Additional compounds, such as Bongkrekic acid and Atractyloside, target the adenine nucleotide translocator, a protein that facilitates the exchange of ATP and ADP between the mitochondrial matrix and the cytosol. By impeding the ANT, these inhibitors interrupt the supply of ADP to the mitochondrial matrix, which is necessary for continuous ATP synthesis by ATP synthase. The uncouplers, 2,4-Dinitrophenol and FCCP, function by dissipating the proton gradient without affecting electron transport, effectively decoupling the ETC from ATP synthesis. This action collapses the electrochemical gradient, rendering ATP synthase incapable of producing ATP. Aurovertin B directly inhibits ATP synthase by binding to its β-subunit, preventing both ATP synthesis and hydrolysis.

SEE ALSO...

Product NameCAS #Catalog #QUANTITYPriceCitationsRATING

Oligomycin A

579-13-5sc-201551
sc-201551A
sc-201551B
sc-201551C
sc-201551D
5 mg
25 mg
100 mg
500 mg
1 g
$179.00
$612.00
$1203.00
$5202.00
$9364.00
26
(1)

Binds to the OSCP subunit of ATP synthase, inhibiting proton translocation and ATP synthesis.

Bongkrekic acid

11076-19-0sc-205606
100 µg
$400.00
10
(1)

Binds to the adenine nucleotide translocator (ANT), preventing the exchange of ADP/ATP across the mitochondrial membrane.

Rotenone

83-79-4sc-203242
sc-203242A
1 g
5 g
$89.00
$259.00
41
(2)

Inhibits mitochondrial complex I, leading to reduced proton gradient and ATP synthesis.

Antimycin A

1397-94-0sc-202467
sc-202467A
sc-202467B
sc-202467C
5 mg
10 mg
1 g
3 g
$55.00
$63.00
$1675.00
$4692.00
51
(1)

Binds to complex III, inhibiting electron transport and reducing ATP production.

2-Thenoyltrifluoroacetone

326-91-0sc-251801
5 g
$37.00
1
(1)

Inhibits complex II, disrupting the electron transport chain and ATP synthesis.

Carboxine

5234-68-4sc-234286
250 mg
$21.00
1
(1)

Inhibits complex II, similarly disrupting electron transport and ATP production.

Sodium azide

26628-22-8sc-208393
sc-208393B
sc-208393C
sc-208393D
sc-208393A
25 g
250 g
1 kg
2.5 kg
100 g
$43.00
$155.00
$393.00
$862.00
$90.00
8
(2)

Inhibits complex IV by binding to the heme-copper center, blocking electron transport and ATP production.

2,4-Dinitrophenol, wetted

51-28-5sc-238345
250 mg
$59.00
2
(1)

Uncouples oxidative phosphorylation by carrying protons across the mitochondrial membrane, collapsing the proton gradient and inhibiting ATP synthesis.

FCCP

370-86-5sc-203578
sc-203578A
10 mg
50 mg
$94.00
$355.00
46
(1)

Protonophore that dissipates the proton gradient across the mitochondrial membrane, inhibiting ATP synthesis.