Date published: 2026-5-30

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KMT5 (lysine methyltransferase) Inhibitors

KMT5 inhibitors are a class of chemical compounds that specifically target and inhibit the activity of KMT5, a lysine methyltransferase enzyme. KMT5, also known as SET8 or PR-Set7, is responsible for catalyzing the methylation of lysine residues on histone proteins, particularly histone H4 at lysine 20 (H4K20). This post-translational modification is crucial for regulating chromatin structure and gene expression. Methylation by KMT5 plays a significant role in the maintenance of genome stability, DNA repair, and the control of cell cycle progression. By inhibiting KMT5, these compounds interfere with the enzyme's ability to add methyl groups to lysine residues, which can lead to alterations in chromatin compaction and downstream effects on gene regulation and cellular processes. The mechanism of action of KMT5 inhibitors typically involves blocking the enzyme's catalytic site or preventing its interaction with histone substrates. Some inhibitors may mimic the substrate or cofactor of the enzyme, competitively binding to the active site, while others might induce conformational changes that disrupt the enzyme's methyltransferase activity. By inhibiting KMT5, these compounds can affect a variety of cellular processes, including chromatin organization, transcriptional repression, and the activation of DNA damage response pathways. Research into KMT5 inhibitors provides critical insights into the role of lysine methylation in chromatin biology and helps to unravel the complex regulatory networks that control gene expression through histone modifications. Understanding how KMT5 inhibition alters chromatin dynamics deepens the broader comprehension of epigenetic regulation and the maintenance of genomic stability in eukaryotic cells.

SEE ALSO...

Product NameCAS #Catalog #QUANTITYPriceCitationsRATING

BIX01294 hydrochloride

1392399-03-9sc-293525
sc-293525A
sc-293525B
1 mg
5 mg
25 mg
$37.00
$112.00
$408.00
(1)

Initially identified as a G9a inhibitor, it also exhibits inhibitory activity against KMT5.

Chaetocin

28097-03-2sc-200893
200 µg
$126.00
5
(1)

A fungal metabolite known to inhibit lysine methyltransferases, including KMT5.

UNC0638

1255580-76-7sc-397012
10 mg
$315.00
(0)

Although primarily targeting G9a and GLP lysine methyltransferases, it may have off-target effects on KMT5 enzymes.

A-366

1527503-11-2sc-507495
10 mg
$195.00
(0)

A selective small molecule inhibitor that targets G9a/GLP but might also affect KMT5 enzymes due to the similarity in their active sites.

Epz004777

1338466-77-5sc-507560
100 mg
$575.00
(0)

A selective inhibitor for DOT1L methyltransferase with potential cross-reactivity to KMT5 enzymes.

MS-275

209783-80-2sc-279455
sc-279455A
sc-279455B
1 mg
5 mg
25 mg
$24.00
$90.00
$212.00
24
(2)

A HDAC inhibitor that can indirectly affect KMT5 activity through broader histone modification pathways.

3-Deazaneplanocin, HCl salt

120964-45-6sc-351856
sc-351856A
sc-351856B
1 mg
5 mg
10 mg
$256.00
$612.00
$936.00
2
(1)

This compound inhibits EZH2, a component of the PRC2 complex, but may also have effects on KMT5 due to overlapping pathways in chromatin remodeling.

GSK343

1346704-33-3sc-397025
sc-397025A
5 mg
25 mg
$151.00
$461.00
1
(0)

An EZH2 inhibitor that could potentially influence KMT5 activity indirectly through epigenetic regulation mechanisms.

(±)-JQ1

1268524-69-1sc-472932
sc-472932A
5 mg
25 mg
$231.00
$863.00
1
(0)

While known as a BET bromodomain inhibitor, its influence on chromatin structure could indirectly affect KMT5 activity.