PCDHB22, a member of the protocadherin family, is a fascinating subject of study within the field of gene expression and regulation. Protocadherins are integral to the establishment and maintenance of complex cellular networks, particularly within the nervous system, where they guide neural circuit formation, synaptic specificity, and plasticity. The gene encoding PCDHB22 is presumed to possess a promoter region rich in CpG islands, which are indicative of dynamic regulatory potential. Histone modification and DNA methylation at these sites are key epigenetic mechanisms that cells utilize to fine-tune gene expression in response to internal and external stimuli. Compounds that modulate these epigenetic marks, such as histone deacetylase inhibitors like Trichostatin A and DNA methyltransferase inhibitors like 5-Aza-2'-deoxycytidine, are therefore of particular interest when exploring the modulation of PCDHB22 expression. By altering the chromatin structure to a more open and transcriptionally active state, these compounds could enhance the transcription of PCDHB22, highlighting the intricate dance between the cellular environment and gene expression.
In addition to epigenetic influences, secondary messenger systems play a pivotal role in the cellular signaling pathways that govern gene regulation. For PCDHB22, compounds such as Forskolin and Dibutyryl-cAMP, which elevate intracellular cAMP levels, could serve as activators. The increase in cAMP activates protein kinase A (PKA), triggering a cascade of phosphorylation events that can culminate in the activation of transcription factors that bind to cAMP response elements within the gene's promoter. Furthermore, endogenous signaling molecules, like beta-estradiol, tie into this regulatory network. Beta-estradiol is known to bind estrogen receptors, which may interact with estrogen response elements in gene promoters, providing another layer of control for PCDHB22 expression. The complexity of these regulatory mechanisms illustrates the elaborate control of gene expression, with a multitude of potential activators contributing to the precise tuning of PCDHB22 within the cellular milieu.
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| Product Name | CAS # | Catalog # | QUANTITY | Price | Citations | RATING |
|---|---|---|---|---|---|---|
Retinoic Acid, all trans | 302-79-4 | sc-200898 sc-200898A sc-200898B sc-200898C | 500 mg 5 g 10 g 100 g | $66.00 $325.00 $587.00 $1018.00 | 28 | |
Retinoic acid might upregulate PCDHBPcdhb22 by binding to retinoic acid receptors, which then interact with retinoic acid response elements in the gene's promoter, stimulating transcription in neural cells. | ||||||
Trichostatin A | 58880-19-6 | sc-3511 sc-3511A sc-3511B sc-3511C sc-3511D | 1 mg 5 mg 10 mg 25 mg 50 mg | $152.00 $479.00 $632.00 $1223.00 $2132.00 | 33 | |
Trichostatin A could promote the transcription of PCDHBPcdhb22 by preventing the deacetylation of histones, leading to a more accessible chromatin state at the gene's regulatory regions. | ||||||
5-Aza-2′-Deoxycytidine | 2353-33-5 | sc-202424 sc-202424A sc-202424B | 25 mg 100 mg 250 mg | $218.00 $322.00 $426.00 | 7 | |
This DNA methyltransferase inhibitor might induce expression of PCDHBPcdhb22 by demethylating CpG islands near the gene's promoter, enhancing the affinity for transcriptional activators. | ||||||
β-Estradiol | 50-28-2 | sc-204431 sc-204431A | 500 mg 5 g | $63.00 $182.00 | 8 | |
β-Estradiol may stimulate the transcription of PCDHBPcdhb22 by estrogen receptor-mediated mechanisms that involve direct binding to estrogen-responsive elements in the gene's promoter. | ||||||
Forskolin | 66575-29-9 | sc-3562 sc-3562A sc-3562B sc-3562C sc-3562D | 5 mg 50 mg 1 g 2 g 5 g | $78.00 $153.00 $740.00 $1413.00 $2091.00 | 73 | |
Forskolin could lead to the upregulation of PCDHBPcdhb22 by increasing cellular cAMP levels, subsequently activating cAMP-responsive element-binding protein (CREB) and enhancing gene transcription. | ||||||
Sodium Butyrate | 156-54-7 | sc-202341 sc-202341B sc-202341A sc-202341C | 250 mg 5 g 25 g 500 g | $31.00 $47.00 $84.00 $222.00 | 19 | |
Sodium butyrate may increase the expression of PCDHBPcdhb22 by inhibiting histone deacetylase, leading to histone hyperacetylation and a subsequent increase in gene transcription. | ||||||
Kainic acid | 487-79-6 | sc-200454 sc-200454A sc-200454B sc-200454C sc-200454D | 5 mg 25 mg 100 mg 1 g 5 g | $87.00 $370.00 $1377.00 $7803.00 $24970.00 | 12 | |
Kainic acid could potentially induce the expression of PCDHBPcdhb22 by activating kainate receptors that stimulate intracellular signaling pathways leading to transcriptional changes in neuronal genes. | ||||||
Valproic Acid | 99-66-1 | sc-213144 | 10 g | $87.00 | 9 | |
Valproic acid might induce the expression of PCDHBPcdhb22 by its histone deacetylase inhibitory effect, which could cause remodeling of the chromatin structure at the gene locus, allowing transcription factor access. | ||||||
Lithium | 7439-93-2 | sc-252954 | 50 g | $214.00 | ||
Lithium chloride may upregulate PCDHBPcdhb22 through the inactivation of GSK-3β, potentially leading to the activation of transcription factors that bind to the PCDHBPcdhb22 promoter region. | ||||||
(−)-Epigallocatechin Gallate | 989-51-5 | sc-200802 sc-200802A sc-200802B sc-200802C sc-200802D sc-200802E | 10 mg 50 mg 100 mg 500 mg 1 g 10 g | $43.00 $73.00 $126.00 $243.00 $530.00 $1259.00 | 11 | |
Epigallocatechin Gallate could stimulate the transcription of PCDHBPcdhb22 by affecting the epigenetic machinery, possibly through altering histone acetylation and DNA methylation patterns associated with the gene. | ||||||