Date published: 2026-4-5

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Mitochondrial Staining

Santa Cruz Biotechnology now offers a broad range of mitochondrial staining chemicals for use in various applications. These specialized staining agents are essential for the detailed visualization and analysis of mitochondria, the powerhouse of the cell. Mitochondrial staining chemicals play a crucial role in cell biology research by allowing scientists to study the structure, distribution, and function of mitochondria within cells. These stains are instrumental in investigating mitochondrial dynamics, including fusion, fission, and biogenesis, as well as in understanding the role of mitochondria in cellular metabolism, apoptosis, and energy production. Researchers utilize mitochondrial stains to identify and characterize mitochondrial morphology and to quantify changes in mitochondrial mass and membrane potential under various experimental conditions. The precision and clarity provided by high-quality mitochondrial staining chemicals from Santa Cruz Biotechnology ensure that researchers can obtain reliable and reproducible data, which is critical for advancing our understanding of cellular physiology and bioenergetics. By enabling the accurate detection and measurement of mitochondrial parameters, these stains facilitate a wide range of applications in basic and applied research. View detailed information on our available mitochondrial staining chemicals by clicking on the product name.

Items 11 to 19 of 19 total

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Product NameCAS #Catalog #QUANTITYPriceCitationsRATING

Mito Red

1021902-10-2sc-301164
8 x 50 µg
$412.00
5
(1)

Mito Red is a fluorescent dye that selectively targets mitochondria, leveraging its lipophilic properties to integrate into the lipid bilayer of mitochondrial membranes. Its unique structure facilitates rapid diffusion across membranes, allowing for real-time monitoring of mitochondrial activity. Mito Red's fluorescence intensity is sensitive to the mitochondrial membrane potential, enabling the assessment of bioenergetic status and cellular health through distinct excitation and emission profiles.

Hemacolor, Eosin

sc-396601
4 L
$143.00
(0)

Hemacolor, Eosin is a specialized dye that exhibits a strong affinity for mitochondrial structures due to its unique electrostatic interactions with mitochondrial proteins. This compound enhances contrast in imaging applications by binding selectively to mitochondrial components, allowing for detailed visualization of mitochondrial morphology. Its distinct absorption characteristics enable effective tracking of mitochondrial dynamics, providing insights into cellular energy metabolism and organelle integrity.

Acridine Orange 10-nonyl bromide

75168-11-5sc-214487
100 mg
$179.00
2
(2)

Acridine Orange 10-nonyl bromide is a fluorescent compound that selectively targets mitochondrial membranes, leveraging its lipophilic properties to integrate into lipid bilayers. This interaction alters the membrane potential, facilitating the study of mitochondrial function and dynamics. Its unique spectral properties allow for real-time monitoring of mitochondrial activity, making it a valuable tool for investigating cellular respiration and oxidative stress responses.

4-(4-Diethylaminostyryl)-1-methylpyridinium iodide

105802-46-8sc-214206
1 g
$87.00
(0)

4-(4-Diethylaminostyryl)-1-methylpyridinium iodide is a cationic dye that exhibits strong affinity for mitochondrial structures due to its positive charge and planar configuration. This compound intercalates within the mitochondrial membrane, influencing electron transport chain dynamics and enhancing fluorescence under specific wavelengths. Its distinct photophysical properties enable detailed visualization of mitochondrial morphology and behavior, providing insights into bioenergetics and cellular signaling pathways.

Tetramethylrhodamine ethyl ester perchlorate

115532-52-0sc-213026
25 mg
$126.00
3
(1)

Tetramethylrhodamine ethyl ester perchlorate is a cationic dye that selectively accumulates in mitochondria, driven by the organelle's negative membrane potential. Its unique structure allows for effective interaction with mitochondrial membranes, facilitating the study of membrane potential and dynamics. The compound exhibits intense fluorescence, which is sensitive to changes in the local environment, making it a powerful tool for real-time imaging of mitochondrial activity and function in live cells.

Rhodamine B, hexyl ester, perchlorate

877933-92-1sc-391078
10 mg
$156.00
(0)

Rhodamine B, hexyl ester, perchlorate is a cationic dye characterized by its hydrophobic hexyl chain, enhancing its affinity for lipid-rich mitochondrial membranes. This compound's unique electrostatic interactions with the negatively charged inner mitochondrial membrane facilitate its selective localization. Its robust fluorescence properties enable the detection of subtle variations in mitochondrial dynamics, providing insights into bioenergetics and cellular metabolism through real-time imaging techniques.

JC-1 chloride

3520-43-2 free basesc-221777
5 mg
$449.00
(0)

JC-1 chloride is a lipophilic cationic compound that selectively accumulates in mitochondria, driven by the membrane potential. Its unique ability to form aggregates in high-energy environments leads to a distinct color shift, allowing for the assessment of mitochondrial health and function. The compound's interaction with the inner mitochondrial membrane is influenced by its charge and hydrophobicity, making it a valuable tool for studying mitochondrial dynamics and energy production.

Rhodamin 700 perchlorate

63561-42-2sc-391133
25 mg
$244.00
(0)

Rhodamin 700 perchlorate is a highly lipophilic dye that exhibits selective affinity for mitochondrial membranes due to its cationic nature. Its unique structural properties enable it to intercalate within lipid bilayers, influencing membrane potential and dynamics. The compound's fluorescence characteristics change in response to mitochondrial environment variations, providing insights into membrane integrity and metabolic activity. This behavior makes it a useful probe for investigating mitochondrial bioenergetics and cellular respiration.

Hemacolor, Methylene Blue

sc-396602
3.8 L
$190.00
(0)

Hemacolor, Methylene Blue, is a cationic dye that demonstrates a strong propensity to localize within mitochondrial structures, primarily due to its positive charge. This localization facilitates its interaction with mitochondrial electron transport chains, where it can modulate redox states and influence electron flow. Its unique ability to act as an electron carrier enhances mitochondrial respiration efficiency, while its distinct spectral properties allow for real-time monitoring of mitochondrial function and oxidative stress responses.