Chemical inhibitors of Scratch2 can achieve functional inhibition through various cellular and biochemical pathways. Alsterpaullone targets cyclin-dependent kinases (CDKs), impairing the cell cycle progression signals that can activate Scratch2, thus leading to its reduced activity. Similarly, Ro-31-8220, by inhibiting protein kinase C (PKC), can decrease the phosphorylation level of Scratch2, which is often a prerequisite for its transcriptional activity. Go6976, another PKC inhibitor, more specifically inhibits PKCα, which can phosphorylate transcription factors, resulting in decreased Scratch2 activity due to the lack of necessary phosphorylation. LY294002, by inhibiting PI3K/Akt signaling, leads to reduced Scratch2 activity as this pathway is involved in the regulation of various transcription factors. SB203580 and PD98059 obstruct the MAPK pathway at different points; SB203580 inhibits p38 MAPK, and PD98059 targets MEK, both of which can regulate Scratch2 activity through phosphorylation.
In the second part of the inhibition spectrum, SP600125, a c-Jun N-terminal kinase (JNK) inhibitor, can reduce Scratch2 activity by impeding the phosphorylation of transcription factors, which JNK can mediate. Y-27632's inhibition of ROCK, which plays a role in transcription factor regulation, can lead to reduced Scratch2 activity. Wortmannin's inhibition of phosphoinositide 3-kinases also reduces Scratch2 activity by preventing activation signals that may regulate transcription factor functionality. U0126, by inhibiting MEK1/2, decreases Scratch2 activity by halting the ERK pathway, which is known for its regulatory role in transcription factor activation. KN-93 specifically inhibits CaMKII, which can affect transcription factor activity, thus leading to decreased Scratch2 activity. Lastly, GF109203X targets protein kinase C isoforms, which, upon inhibition, can lead to reduced Scratch2 activity due to the decreased phosphorylation of transcription factors that PKC would typically mediate.
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