Chemical inhibitors of NWD1 function by altering the epigenetic landscape within cells, primarily through the inhibition of histone deacetylases (HDACs). Trichostatin A, Vorinostat, Panobinostat, Romidepsin, Valproic Acid, Entinostat, Belinostat, Quisinostat, Tacedinaline, Mocetinostat, Chidamide, and Givinostat all share a common mechanism: they inhibit HDACs, which are enzymes that remove acetyl groups from histone proteins, leading to a more condensed chromatin structure and reduced gene expression. By inhibiting HDACs, these chemicals increase the acetylation of histones, thereby promoting a more open chromatin structure which can lead to altered gene expression patterns. As a result, the expression of NWD1 is inhibited because the protein's synthesis is directly regulated by the accessibility of its gene in the chromatin structure.
The inhibition of HDACs leads to increased acetylation of histones, which changes the interaction between DNA and histones, affecting the transcriptional machinery's access to DNA. This change in the chromatin structure can inhibit the transcription of genes, including those coding for NWD1. Trichostatin A and Vorinostat, for instance, are known to cause accumulation of acetylated histones, which can suppress the expression of specific genes, such as NWD1. Similarly, Panobinostat and Romidepsin function by accumulating acetylated histones in the chromatin, leading to repression of gene expression, including NWD1. The other HDAC inhibitors listed, such as Valproic Acid and Entinostat, also lead to increased histone acetylation, thereby inhibiting NWD1, albeit their selectivity and potency may vary.
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