MBD3L4 function by modulating the methylation landscape of DNA, which in turn affects the ability of this protein to recognize and bind to methylated regions of the genome. Bromodomain inhibitor JQ1 alters chromatin structure and gene expression by inhibiting the binding of bromodomain-containing proteins to acetylated histones, which can facilitate the activation of MBD3L4 by exposing new methylated DNA sites for binding. Similarly, DNA methyltransferase inhibitors such as 5-aza-2'-deoxycytidine, RG108, SGI-1027, and Zebularine directly reduce DNA methylation levels, which can enhance the functional role of MBD3L4 in binding to DNA. These agents cause hypomethylation of DNA, potentially leading to the activation of MBD3L4 due to increased recognition of aberrantly methylated DNA regions that would otherwise be repressed.
Other chemical activators, including Parthenolide, Disulfiram, Procaine, Hydralazine, Epigallocatechin gallate, and Genistein, operate through similar mechanisms of altering methylation patterns, which can activate MBD3L4. Parthenolide, for instance, can influence DNA methylation and thereby modulate MBD3L4's activity. Disulfiram, known for its DNA methyltransferase inhibitory action, can lead to global hypomethylation, which may alter the binding affinity of MBD3L4 to methylated DNA sites. Procaine and Hydralazine, as demethylating agents, can activate MBD3L4 by enhancing the protein's ability to bind to its target DNA sequences. Epigallocatechin gallate and Genistein, with their DNA methyltransferase inhibitory activity, can change DNA methylation patterns, facilitating the activation of MBD3L4 by altering its DNA-binding dynamics. These chemical-induced modifications in DNA methylation status are critical for the activation of MBD3L4, enabling it to partake in the regulatory processes it is involved with.
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