Chemical inhibitors of CLPX can exert their inhibitory effects through various mechanisms that interfere with the protein's functional pathways. Hsp70 inhibitors such as pifithrin-μ and Ver-155008 disrupt the collaboration between CLPX and the Hsp70 family of proteins, which is essential for proper protein degradation. Since CLPX works closely with Hsp70 proteins, the inhibition of these chaperones results in a downstream inhibition of CLPX's role in protein processing. Proteasome inhibitors like MG132 and Lactacystin cause an accumulation of polyubiquitinated proteins, which burdens the protein degradation pathways and indirectly prevents CLPX from performing its function effectively. This is because the proteostasis network, which includes the proteasome system, is interconnected, and dysregulation of one component can affect the others.
Other inhibitors, such as Concanamycin A and Bafilomycin A1, disrupt cellular compartments by inhibiting V-ATPases, impairing the acidic environment required for lysosomal and proteasomal degradation. Since the functional integrity of CLPX is dependent on these cellular processes, their disruption can lead to a reduction in CLPX activity. Lastly, inhibitors like EerI and Epoxomicin interfere with specific degradation pathways such as ER-associated degradation (ERAD) and the ubiquitin-proteasome system, respectively. By doing so, they indirectly hinder the role of CLPX within these pathways, leading to its functional inhibition.
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