Date published: 2026-5-9

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POLR3E Inhibitors

POLR3E, also known as RPC5, is a component of the RNA polymerase III (Pol III) complex, which is responsible for synthesizing a variety of small RNAs in eukaryotic cells, including 5S ribosomal RNA (rRNA), tRNAs, and some other small nuclear RNAs. The Pol III complex is composed of several subunits, and POLR3E is one of the integral parts ensuring the proper functioning of this complex. Given its pivotal role in RNA synthesis, POLR3E is essential for maintaining the normal cellular processes that rely on the products of RNA polymerase III.

Inhibitors targeting POLR3E are specialized molecules designed to interact with and modulate the activity of the POLR3E protein. By binding to this protein or its associated interaction sites within the Pol III complex, these inhibitors can potentially disrupt or downregulate the synthesis of RNAs that are transcribed by RNA polymerase III. The development of POLR3E inhibitors stems from a deep understanding of the protein's structure, its role within the Pol III complex, and the broader implications of Pol III activity within the cell. The specificity of these inhibitors ensures that they interact primarily with POLR3E, providing a unique opportunity to study the role of this protein and its associated RNA synthesis pathways in detail. Using POLR3E inhibitors, researchers can delve deeper into the molecular mechanisms underpinning Pol III-mediated RNA synthesis and the intricate balance of cellular processes that rely on the products of this polymerase.

SEE ALSO...

Product NameCAS #Catalog #QUANTITYPriceCitationsRATING

Bongkrekic acid

11076-19-0sc-205606
100 µg
$400.00
10
(1)

Inhibits RNA polymerases. It might have an indirect effect on POLR3E given its broader targeting.

Triptolide

38748-32-2sc-200122
sc-200122A
1 mg
5 mg
$90.00
$204.00
13
(1)

Known to inhibit RNA polymerase II and has shown effects on RNA polymerase III. Might influence POLR3E indirectly.

α-Amanitin

23109-05-9sc-202440
sc-202440A
1 mg
5 mg
$269.00
$1050.00
26
(2)

Mainly inhibits RNA polymerase II but might have off-target effects on polymerase III, indirectly affecting POLR3E.

Leptomycin B

87081-35-4sc-358688
sc-358688A
sc-358688B
50 µg
500 µg
2.5 mg
$107.00
$416.00
$1248.00
35
(2)

Inhibits nuclear export, which might indirectly affect proteins involved in transcription, including POLR3E.

Actinomycin D

50-76-0sc-200906
sc-200906A
sc-200906B
sc-200906C
sc-200906D
5 mg
25 mg
100 mg
1 g
10 g
$74.00
$243.00
$731.00
$2572.00
$21848.00
53
(3)

Binds to DNA and inhibits RNA polymerases. This could potentially affect POLR3E function indirectly.

Camptothecin

7689-03-4sc-200871
sc-200871A
sc-200871B
50 mg
250 mg
100 mg
$58.00
$186.00
$94.00
21
(2)

Although it's primarily a DNA topoisomerase I inhibitor, it affects transcription and might have off-target effects on POLR3E.

DRB

53-85-0sc-200581
sc-200581A
sc-200581B
sc-200581C
10 mg
50 mg
100 mg
250 mg
$43.00
$189.00
$316.00
$663.00
6
(1)

Inhibits transcription and might have indirect effects on RNA polymerase III and POLR3E.

BMH-21

896705-16-1sc-507460
10 mg
$165.00
(0)

Inhibits RNA polymerase I but might have off-target effects on RNA polymerase III and thus POLR3E.

CX-5461

1138549-36-6sc-507275
5 mg
$245.00
(0)

Known to inhibit RNA polymerase I but its broader effects might influence POLR3E.

Ivermectin

70288-86-7sc-203609
sc-203609A
100 mg
1 g
$57.00
$77.00
2
(2)

Affects various cellular processes and might indirectly influence transcription and POLR3E.