Date published: 2025-10-25

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ND6 Inhibitors

The class of ND6 Inhibitors, as defined here, encompasses a diverse range of chemicals that indirectly inhibit the NADH Dehydrogenase Subunit 6 (ND6) by targeting various components of the mitochondrial respiratory chain. ND6 is a critical component of complex I, the first and largest enzyme complex of the mitochondrial electron transport chain, playing a vital role in cellular energy production through oxidative phosphorylation.

These inhibitors, such as Rotenone, Piericidin A, and Caprolactone, function by interfering with different aspects of the mitochondrial respiratory chain. Some, like Rotenone and Piericidin A, specifically target complex I, where ND6 is located, by obstructing electron transfer and thereby reducing the efficiency of oxidative phosphorylation. Rotenone binds to iron-sulfur clusters within complex I, while Piericidin A acts as a ubiquinone antagonist. Others, such as Methylene blue and Dimethyl sulfoxide, modulate mitochondrial function more indirectly. Methylene blue serves as an alternative electron acceptor, potentially compensating for impaired complex I activity, whereas DMSO alters membrane permeability, affecting the overall mitochondrial dynamics.

Moreover, compounds like Antimycin A, TTFA, Carboxin, and Atpenin A5, although primarily targeting other complexes (III and II, respectively), can exert a secondary effect on complex I. This is due to the interconnected nature of the respiratory chain, where inhibition of one complex can lead to compensatory changes in the activity of others. Similarly, inhibitors of complex IV (such as Sodium azide and Cyanide) and complex V (like Oligomycin) can indirectly influence complex I function and, consequently, ND6 activity. These effects may stem from altered proton gradients and the resultant feedback mechanisms within the mitochondrial matrix.

SEE ALSO...

Product NameCAS #Catalog #QUANTITYPriceCitationsRATING

Rotenone

83-79-4sc-203242
sc-203242A
1 g
5 g
$89.00
$254.00
41
(1)

Rotenone is a natural compound that inhibits mitochondrial complex I. It acts by binding to the iron-sulfur clusters within the complex, leading to reduced electron transfer and energy production.

Piericidin A

2738-64-9sc-202287
2 mg
$285.00
24
(1)

Piericidin A is a natural antibiotic and a potent inhibitor of complex I. It mimics the action of ubiquinone, interfering with electron transfer.

Methylene blue

61-73-4sc-215381B
sc-215381
sc-215381A
25 g
100 g
500 g
$42.00
$102.00
$322.00
3
(1)

Methylene blue acts as an alternative electron acceptor in the mitochondrial respiratory chain, indirectly modulating the activity of complex I.

Dimethyl Sulfoxide (DMSO)

67-68-5sc-202581
sc-202581A
sc-202581B
100 ml
500 ml
4 L
$30.00
$115.00
$900.00
136
(6)

DMSO can indirectly affect mitochondrial function by altering membrane permeability and fluidity, potentially influencing complex I activity.

Antimycin A

1397-94-0sc-202467
sc-202467A
sc-202467B
sc-202467C
5 mg
10 mg
1 g
3 g
$54.00
$62.00
$1642.00
$4600.00
51
(1)

Though primarily targeting complex III, Antimycin A can cause a compensatory effect on complex I, indirectly impacting ND6 activity.

2-Thenoyltrifluoroacetone

326-91-0sc-251801
5 g
$36.00
1
(1)

TTFA is a specific inhibitor of mitochondrial complex II but may have secondary effects on complex I, indirectly influencing ND6.

Carboxine

5234-68-4sc-234286
250 mg
$21.00
1
(1)

Carboxin inhibits mitochondrial complex II, which can have downstream effects on complex I and ND6.

Atpenin A5

119509-24-9sc-202475
sc-202475A
sc-202475B
sc-202475C
250 µg
1 mg
10 mg
50 mg
$140.00
$424.00
$2652.00
$12240.00
17
(1)

Atpenin A5 is a potent inhibitor of mitochondrial complex II, potentially affecting the overall mitochondrial respiratory chain including ND6.

Sodium azide

26628-22-8sc-208393
sc-208393B
sc-208393C
sc-208393D
sc-208393A
25 g
250 g
1 kg
2.5 kg
100 g
$42.00
$152.00
$385.00
$845.00
$88.00
8
(2)

Sodium azide inhibits cytochrome c oxidase in complex IV, which could lead to altered function of complex I and indirect inhibition of ND6.

Oligomycin

1404-19-9sc-203342
sc-203342C
10 mg
1 g
$146.00
$12250.00
18
(2)

While targeting ATP synthase (complex V), Oligomycin’s action can lead to an increased proton gradient, indirectly affecting complex I and ND6