Ubr7 inhibitors constitute a class of chemical compounds specifically designed for research purposes, targeting the Ubiquitin protein ligase E3 component n-recognin 7 (Ubr7). Ubr7 is part of the ubiquitin-proteasome system, a critical pathway in cellular regulation that involves tagging unwanted or damaged proteins with ubiquitin for degradation. As an E3 ubiquitin ligase, Ubr7 plays a pivotal role in this process by recognizing specific protein substrates and facilitating their ubiquitination, which marks them for degradation by the proteasome. The mechanism of action of Ubr7 inhibitors can be either direct or indirect. Direct inhibitors typically function by binding to the active site of Ubr7, thereby interfering with its ability to interact with its substrates or with the E2 ubiquitin-conjugating enzyme. This interaction is crucial for the transfer of ubiquitin from the E2 enzyme to the substrate protein. By blocking this interaction, direct inhibitors prevent the ubiquitination of substrate proteins, thereby impeding their subsequent degradation.
Indirect inhibitors, on the other hand, may not bind to Ubr7 directly. Instead, they might influence the protein's activity by altering its expression levels, post-translational modifications, or interaction with other proteins that regulate its function. For example, compounds that affect the upstream signaling pathways that regulate Ubr7 expression or activation can indirectly modulate its activity. Similarly, molecules that alter the cellular localization of Ubr7 or its availability can also serve as indirect inhibitors. In research settings, Ubr7 inhibitors are valuable tools for investigating the role of ubiquitination in cellular processes. By modulating Ubr7 activity, researchers can study its involvement in the regulation of protein turnover, signal transduction, and cellular homeostasis. These studies are crucial for understanding the mechanisms of protein degradation and the broader implications of ubiquitin-mediated regulation in cellular physiology.
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