Wortmannin and LY294002 share a common target in the PI3K pathway, a pivotal signaling route that governs cell growth and survival. By binding to the catalytic site of PI3K, these molecules prevent the activation of downstream proteins, including Akt, which in turn can suppress the functional output of proteins regulated by this axis. Similarly, SB203580 and PD98059, which are selective for p38 MAP kinase and MEK respectively, intercept the MAPK/ERK pathway, a critical mediator of cell proliferation and differentiation signals. This interception can restrict the phosphorylation and subsequent activation of proteins that are downstream effectors within this signaling pathway. SP600125, as a JNK inhibitor, can decrease JNK-mediated responses, such as apoptosis and inflammation, by impeding the phosphorylation of proteins that JNK typically targets. Trichostatin A, with its histone deacetylase inhibitory activity, can lead to changes in gene expression patterns by promoting a more open chromatin structure, which can affect the synthesis of a myriad of proteins.
Rapamycin acts on the mTOR complex, a central hub for nutrient and growth factor signaling, by specifically binding to mTOR and consequently dampening the activity of proteins involved in cell growth and metabolism. Bortezomib targets the proteasome, a protein complex responsible for degrading unneeded or damaged proteins. By inhibiting this proteolytic activity, Bortezomib can cause an accumulation of regulatory proteins, altering various cellular processes including the cell cycle. U0126, another MEK inhibitor, functions similarly to PD98059, disrupting the MAPK/ERK signaling and affecting proteins that rely on this pathway for their activation or repression. Z-VAD-FMK prevents the initiation of apoptosis by binding to caspases, which are responsible for the execution phase of cell death, thus influencing the stability and survival of proteins that would otherwise be degraded during apoptosis. Staurosporine, with its broad kinase inhibition profile, can alter a wide array of phosphorylation-dependent protein functions, affecting numerous signaling pathways and cellular processes. Lastly, cycloheximide disrupts protein synthesis by inhibiting the elongation phase of translation on ribosomes, leading to a reduction in the cellular protein pool.
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