Date published: 2026-4-1

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DDX39 Inhibitors

DDX39 inhibitors belong to a class of compounds designed to target and modulate the activity of the DDX39 helicase protein. DDX39, also known as UAP56, is a member of the DEAD-box RNA helicase family and plays a crucial role in various cellular processes, particularly those related to RNA metabolism. This protein is involved in the unwinding of RNA duplexes, making it essential for pre-mRNA splicing, mRNA export from the nucleus, and translation initiation. The development of DDX39 inhibitors aims to selectively interfere with the enzymatic functions of DDX39, ultimately influencing the intricate network of cellular processes in which this helicase is implicated.

The rational design of DDX39 inhibitors involves identifying small molecules or compounds that can interact specifically with the active site or regulatory domains of the DDX39 protein. These inhibitors work by either blocking the ATP-binding site essential for the helicase activity or by disrupting protein-protein interactions crucial for the formation of functional RNA-protein complexes. By impeding DDX39-mediated processes, these inhibitors offer a powerful tool for researchers to dissect the molecular mechanisms underlying RNA metabolism.

SEE ALSO...

Product NameCAS #Catalog #QUANTITYPriceCitationsRATING

Pladienolide B

445493-23-2sc-391691
sc-391691B
sc-391691A
sc-391691C
sc-391691D
sc-391691E
0.5 mg
10 mg
20 mg
50 mg
100 mg
5 mg
$299.00
$5699.00
$11099.00
$25500.00
$66300.00
$2875.00
63
(2)

Binds to the SF3b complex and disrupts splicing, potentially affecting proteins like DDX39.

Spliceostatin A

391611-36-2sc-507481
1 mg
$1800.00
(0)

Targets the spliceosome and may indirectly affect DDX39 function by altering RNA splicing.

Isoginkgetin

548-19-6sc-507430
5 mg
$225.00
(0)

A biflavonoid that inhibits splicing, possibly affecting DDX39's involvement in RNA processing.

Madrasin

374913-63-0sc-507563
100 mg
$750.00
(0)

A splicing inhibitor that could alter RNA processing events involving DDX39.

Herbimycin A

70563-58-5sc-3516
sc-3516A
100 µg
1 mg
$277.00
$1532.00
13
(1)

A tyrosine kinase inhibitor; while not direct, it could affect signaling pathways involving DDX39.

Silvestrol

697235-38-4sc-507504
1 mg
$920.00
(0)

Inhibitor of eukaryotic initiation factor 4A, which may interact with DDX39 in RNA translation.

Rocaglamide

84573-16-0sc-203241
sc-203241A
sc-203241B
sc-203241C
sc-203241D
100 µg
1 mg
5 mg
10 mg
25 mg
$275.00
$474.00
$1639.00
$2497.00
$5344.00
4
(1)

Similar to Silvestrol, it affects translation and could indirectly affect DDX39's function.