Date published: 2026-4-1

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ATP5E Inhibitors

ATP5E inhibitors are a class of chemical compounds that specifically target and inhibit the activity of ATP synthase subunit epsilon (ATP5E), an integral component of the ATP synthase enzyme complex. ATP synthase is a highly conserved and essential enzyme located in the inner membrane of mitochondria, responsible for synthesizing adenosine triphosphate (ATP), the primary energy carrier in biological systems. The epsilon subunit (ATP5E) plays a crucial regulatory role in the assembly and stability of the ATP synthase complex, ensuring proper coordination between the F1 and Fo components of the enzyme during the catalytic process. By modulating the structural integrity and function of ATP5E, inhibitors in this chemical class disrupt the overall activity of the ATP synthase complex, leading to altered ATP production and energy homeostasis in cells.

Chemically, ATP5E inhibitors often possess unique structural features that enable them to bind specifically to the epsilon subunit or to its associated regions within the ATP synthase complex. This binding typically induces conformational changes in the enzyme, which can impact its ability to rotate and catalyze ATP synthesis efficiently. The inhibition of ATP5E can result in the uncoupling of proton gradients across the mitochondrial membrane, affecting the proton motive force required for ATP production. As a result, cells may experience disruptions in energy-dependent processes, including metabolism, ion transport, and signal transduction. Investigations into ATP5E inhibitors provide insights into the broader understanding of energy metabolism and the fine-tuned regulation of mitochondrial functions, making them of significant interest in biochemical and molecular studies focused on cellular energetics.

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Product NameCAS #Catalog #QUANTITYPriceCitationsRATING

Oligomycin

1404-19-9sc-203342
sc-203342C
10 mg
1 g
$149.00
$12495.00
18
(2)

A known inhibitor of the ATP synthase complex; can block ATP synthesis by targeting its F_O subunit.

DCC

538-75-0sc-239713
sc-239713A
25 g
100 g
$72.00
$208.00
3
(1)

Binds to the proton channel of ATP synthase, inhibiting its activity.

Bafilomycin A1

88899-55-2sc-201550
sc-201550A
sc-201550B
sc-201550C
100 µg
1 mg
5 mg
10 mg
$98.00
$255.00
$765.00
$1457.00
280
(6)

Specific inhibitor of the V-ATPase, can indirectly influence ATP5E's role in the cell.

FCCP

370-86-5sc-203578
sc-203578A
10 mg
50 mg
$94.00
$355.00
46
(1)

Uncouples mitochondrial oxidative phosphorylation, impacting ATP synthesis.

Sodium azide

26628-22-8sc-208393
sc-208393B
sc-208393C
sc-208393D
sc-208393A
25 g
250 g
1 kg
2.5 kg
100 g
$43.00
$155.00
$393.00
$862.00
$90.00
8
(2)

Inhibits cytochrome oxidase, affecting electron transport and subsequent ATP synthesis.

Rotenone

83-79-4sc-203242
sc-203242A
1 g
5 g
$89.00
$259.00
41
(2)

Inhibits mitochondrial complex I, impacting ATP synthesis indirectly.

Antimycin A

1397-94-0sc-202467
sc-202467A
sc-202467B
sc-202467C
5 mg
10 mg
1 g
3 g
$55.00
$63.00
$1675.00
$4692.00
51
(1)

Inhibitor of complex III of the electron transport chain, which can affect ATP synthesis.

Myxothiazol

76706-55-3sc-507550
1 mg
$148.00
(0)

Blocks electron transfer in the mitochondrial complex III, influencing ATP synthesis.

Valinomycin

2001-95-8sc-200991
25 mg
$250.00
3
(1)

Acts as a potassium ionophore, disrupting mitochondrial membrane potential and ATP production.